miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|31085886|gb|CD287843.1|CD287843 GAGAGCAGCTTGGGAAGTTGATTCTGGTCACCGAAATACCTATTATGCCTCTATTGCAAAGGCATATGNCTGGAGTATCG
CAAATCAGTTAGCTTCCGATGCTGTTCAGATTTTTGGAGGCAATGGATTTAATACCGAATATCCTGTAGAAAAATTAATG
AGGGATGCCAAGATCTATCAGATTTATGAAGGTACAGCACAAATTCAAAGGCTTATTATAGCTCGTGAACACATTGGCAG
GTATAAAAACTAACCAGATCACCGTGTTAATAATTCTTGAGTAATTAAAATAAGATCTACTGTTCTAAACTCCAGGAAAG
AGGAAGGGCTTTAAGGTTTTTTTTGCCAGTGAAAATTTTAACATAGATTCTCTTGTACTAAACCTGTATAACTGATTCTA
ATAGTATTCAGTTGGCCAAAAGGTTTGTTTGGGTTTTTCTGTAATGCTATGAAAAAACCTGAATGAACTTTTGGGCCAAC
CCAAGTTTTCTACTTTTGGTTAACTTTATGAC




Most similar to sp|Q3SZB4|ACADM_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q3SZB4|ACADM_BOVIN Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial OS=Bos taurus GN=ACADM PE=2 SV=1
          Length = 421

 Score =  157 bits (398), Expect = 3e-38
 Identities = 78/82 (95%), Positives = 78/82 (95%)
 Frame = +2

Query: 2   RAAWEVDSGHRNTYYASIAKAYXWSIANQLASDAVQIFGGNGFNTEYPVEKLMRDAKIYQ 181
           RAAWEVDSG RNTYYASIAKAY   IANQLASDAVQIFGGNGFNTEYPVEKLMRDAKIYQ
Sbjct: 339 RAAWEVDSGRRNTYYASIAKAYAGDIANQLASDAVQIFGGNGFNTEYPVEKLMRDAKIYQ 398

Query: 182 IYEGTAQIQRLIIAREHIGRYK 247
           IYEGTAQIQRLIIAREHIGRYK
Sbjct: 399 IYEGTAQIQRLIIAREHIGRYK 420